BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012D03SP1|AL426351
(780 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1228 1496 0.0
>3x_Contig1228
Length = 5992
Score = 1496 bits (754), Expect = 0.0
Identities = 774/780 (99%), Gaps = 1/780 (0%)
Strand = Plus / Plus
Query: 1 gatctctgcatacaacattggtcaagtaattgtattagaatctttactctttcatgtaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2218 gatctctgcatacaacattggtcaagtaattgtattagaatctttactctttcatgtaac 2277
Query: 61 gtggtaagttatctaatttaaacgttatgcattagttaattgaagatatctatatgtgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2278 gtggtaagttatctaatttaaacgttatgcattagttaattgaagatatctatatgtgaa 2337
Query: 121 gtggaatataataatgaagaccggaattctctatcaatcttcctccttttctctgcgttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2338 gtggaatataataatgaagaccggaattctctatcaatcttcctccttttctctgcgttg 2397
Query: 181 cctgatcagtgacgcaatttttgaatgtggttgaagcggttcaatgtcgacagagcttgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2398 cctgatcagtgacgcaatttttgaatgtggttgaagcggttcaatgtcgacagagcttgt 2457
Query: 241 aggaaaatcttgatcttctgtttgataacaatgaggaccatcagaaaagataggaatatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2458 aggaaaatcttgatcttctgtttgataacaatgaggaccatcagaaaagataggaatatc 2517
Query: 301 aactaaagaaccccttgaattgattttggaaagtgcattagatacactagaatcatttga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2518 aactaaagaaccccttgaattgattttggaaagtgcattagatacactagaatcatttga 2577
Query: 361 atagaccgaagatgaacgacttctagtgtttggttcttcatcagcttcacgatctgaatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2578 atagaccgaagatgaacgacttctagtgtttggttcttcatcagcttcacgatctgaatc 2637
Query: 421 tttatcctctatttctgagccatcattttcgaagaattctttccgtagctctcttttctc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2638 tttatcctctatttctgagccatcattttcgaagaattctttccgtagctctcttttctc 2697
Query: 481 cttcaaatctgggaaaaccattggacctaaatcattacacacctcagtaatatcttgact 540
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2698 cttcaaatct-ggaaaaccattggacctaaatcattacacacctcagtaatatcttgact 2756
Query: 541 aagcttcatcctggttttctttaatttctcacaagtatgaccgggataaagcaaagacac 600
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2757 aagcttcatcctggttttctttaatttctcacaagtatgacctggataaagcaaagacac 2816
Query: 601 taacaaaggtgggaatgatttgactatatccatcccaatttctccggtaacaaaactgac 660
|||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 2817 taacaaaggtgggaattattttactatatccatcccaatttctcctgtaacaaaactgac 2876
Query: 661 atacgtggcgagaatyaacaccacatagcaatagataaagtacaagagtttgctcttgaa 720
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2877 atacgtggcgagaatcaacaccacatagcaatagataaagtacaagagtttgctcttgaa 2936
Query: 721 gataaaatgtggaacaattaaccagttgtagagagatgggtgtttccttgtgatataaac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2937 gataaaatgtggaacaattaaccagttgtagagagatgggtgtttccttgtgatataaac 2996
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6756
Number of Sequences: 1807
Number of extensions: 6756
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 780
length of database: 10,358,551
effective HSP length: 16
effective length of query: 764
effective length of database: 10,329,639
effective search space: 7891844196
effective search space used: 7891844196
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)